SPMt map

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Inheritance graph

Defined in file : brainvisa/toolboxes/structural_analysis/types/structural.py

Used in the following processes

1 - Mask from SPMt
2 - Primal Sketch from SPMt
Import SPMt for structural analysis

Associated formats

Aperio svs
BMP image
BrainVISA volume formats
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIF image
GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
PBM image
PGM image
PNG image
PPM image
Sakura svslide
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
VIDA image
XBM image
XPM image
Zeiss czi

Associated ontology rules

  • brainvisa-3.2.0 :
  • {center}/{subject}/spmt/con_{contrast}/<subject>_spmt_<contrast>
  • brainvisa-3.0 :
  • {protocol}/{subject}/spmt/con_{contrast}/<subject>_spmt_<contrast>
  • brainvisa-3.1.0 :
  • {protocol}/{subject}/spmt/con_{contrast}/<subject>_spmt_<contrast>

    Key attributes

  • brainvisa-3.2.0 :
  • center ,  subject ,  contrast
  • brainvisa-3.0 :
  • protocol ,  subject ,  contrast
  • brainvisa-3.1.0 :
  • protocol ,  subject ,  contrast